PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678295696
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family B3
Protein Properties Length: 233aa    MW: 26911.5 Da    PI: 4.8755
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678295696genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.75.8e-1554146190
                EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSSEE CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk.ldgrsef 90 
                f k+l++sdv+ ++r+vlpkk ae+h    ++k  e+++l ++d +g   W +k+++  +++s++yvl+  + +F + +gL   D ++ + +++  ++
  678295696  54 FMKQLKNSDVGVLRRMVLPKKEAEAHlpilDYK--EGIQLDMTDMDGiHHWCFKYRFwpNNNSRMYVLE-STGDFIHVHGLVKDDYILVYqYID--DG 146
                89**************************76655..7789********9*******9989999999***9.9***********999887662444..44 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.108.9E-2149157IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.03E-1652142IPR015300DNA-binding pseudobarrel domain
CDDcd100171.59E-2053154No hitNo description
SMARTSM010192.9E-1054156IPR003340B3 DNA binding domain
PfamPF023623.7E-1154147IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MENNGDLFPR QGFTVPRGAR MPRSRVKRSS LAFLALPPPP TLRALDRSKL RYLFMKQLKN  60
SDVGVLRRMV LPKKEAEAHL PILDYKEGIQ LDMTDMDGIH HWCFKYRFWP NNNSRMYVLE  120
STGDFIHVHG LVKDDYILVY QYIDDGRYVI EAKKNRDLPT ATPALASNAA DPADEYAPFP  180
CLPDAFEELD LLYEYDTSFL DDSPLDYVGE SIYFPSIESN YEASFIDLRN PQD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098957.16e-73PREDICTED: B3 domain-containing transcription factor FUS3-like isoform X1
SwissprotQ9LW314e-49FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLA0A022QSZ81e-65A0A022QSZ8_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80452125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.15e-47B3 family protein